Task

No title

25b4d14e-0771-444e-ba3b-ab4f6d32a1f9
Submitted at: March 3, 2025, 12:22 p.m.
Task status: Finished
Number of beads: 314
Number of restraints: 7
Initial Structure type: line
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Structure energy: 52.531 kJ/mol
Beads per interaction: 44.857 beads/interaction
base pairs per interaction: 224 286 bp/interaction
Region: chr17:58760000-60330000
Region length: 1 570 001 bp
Effective resolution: 5000 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads
arc diagram
Arc height is proportional to it's length.
Restraints
  • 8 144
  • 63 142
  • 106 144
  • 126 143
  • 147 175
  • 148 232
  • 191 231
Interactions 
  • chr17	58790000	58800000	chr17	59470000	59480000	40
  • chr17	59070000	59075000	chr17	59465000	59470000	36
  • chr17	59280000	59290000	chr17	59470000	59480000	117
  • chr17	59385000	59390000	chr17	59470000	59475000	61
  • chr17	59490000	59495000	chr17	59630000	59635000	38
  • chr17	59490000	59500000	chr17	59910000	59920000	39
  • chr17	59710000	59715000	chr17	59910000	59915000	52
Interactive structure preview
genome coordinates
58760000
59074000
59388000
59702000
60016000
60330000
1
32
63
94
126
157
188
220
251
282
314
model coordinates
Distance map distance map