Task

chr9:118353331-119424379

413e2a7c-dcc3-48dd-a98c-60d6da0cd6b4
Submitted at: June 24, 2024, 8:54 a.m.
Task status: Error
Number of beads: 535
Number of restraints: 23
Initial Structure type: pure random walk
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Beads per interaction: 23.261 beads/interaction
base pairs per interaction: 46 567 bp/interaction
Region: chr9:118353331-119424379
Region length: 1 071 049 bp
Effective resolution: 2002 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads
arc diagram
Arc height is proportional to it's length.
Restraints
  • 147 491
  • 2 287
  • 287 535
  • 3 491
  • 1 491
  • 1 529
  • 1 536
  • 2 452
  • 2 491
  • 2 529
  • 2 536
  • 147 529
  • 147 536
  • 280 491
  • 280 529
  • 280 536
  • 286 452
  • 286 491
  • 286 529
  • 286 536
  • 452 491
  • 452 536
  • 280 286
Interactions 
  • chr9	118646156	118646307	chr9	119334371	119334722	3
  • chr9	118355206	118356016	chr9	118925809	118926126	3
  • chr9	118925717	118926053	chr9	119421259	119421500	3
  • chr9	118357833	118358380	chr9	119334095	119334757	3
  • chr9	118353331	118354216	chr9	119333348	119335557	4
  • chr9	118353331	118354216	chr9	119408919	119410240	5
  • chr9	118353331	118354216	chr9	119422559	119424379	6
  • chr9	118355332	118358172	chr9	119256183	119258133	4
  • chr9	118355332	118358172	chr9	119333348	119335557	12
  • chr9	118355332	118358172	chr9	119408919	119410240	4
  • chr9	118355332	118358172	chr9	119422559	119424379	16
  • chr9	118645379	118646625	chr9	119408919	119410240	4
  • chr9	118645379	118646625	chr9	119422559	119424379	9
  • chr9	118911436	118913722	chr9	119333348	119335557	27
  • chr9	118911436	118913722	chr9	119408919	119410240	8
  • chr9	118911436	118913722	chr9	119422559	119424379	16
  • chr9	118924055	118926601	chr9	119256183	119258133	11
  • chr9	118924055	118926601	chr9	119333348	119335557	26
  • chr9	118924055	118926601	chr9	119408919	119410240	9
  • chr9	118924055	118926601	chr9	119422559	119424379	12
  • chr9	119256183	119258133	chr9	119333348	119335557	13
  • chr9	119256183	119258133	chr9	119422559	119424379	8
  • chr9	118911436	118913722	chr9	118924055	118926601	4