Task

TestN50

52557552-93f3-42a7-a7e2-26044e0a2376
Submitted at: May 25, 2024, 7:59 p.m.
Task status: Error
Number of beads: 59324
Number of restraints: 30
Initial Structure type: self-avoiding random walk
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Beads per interaction: 1977.467 beads/interaction
base pairs per interaction: 3 954 967 bp/interaction
Region: chr10:5398000-124047000
Region length: 118 649 001 bp
Effective resolution: 2000 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads
arc diagram
Arc height is proportional to it's length.
Restraints
  • 1 2177
  • 147 154
  • 586 14971
  • 970 1007
  • 1204 1209
  • 3454 3477
  • 3495 4135
  • 4153 4180
  • 4155 4180
  • 5865 5916
  • 7990 8061
  • 9752 9766
  • 10521 10923
  • 11589 11596
  • 22495 22502
  • 23167 23174
  • 25534 25643
  • 26439 56679
  • 31845 31963
  • 33148 33188
  • 33428 33467
  • 33850 33860
  • 34226 34362
  • 34386 34392
  • 34802 34809
  • 43776 43784
  • 45684 45814
  • 48518 59325
  • 49028 49040
  • 50236 51040
Interactions 
  • chr10	5398341	5398994	chr10	9749820	9750424	10
  • chr10	5690969	5693029	chr10	5704310	5705934	6
  • chr10	6567993	6568635	chr10	35338678	35339212	3
  • chr10	7337440	7338260	chr10	7410521	7411502	4
  • chr10	7805182	7806306	chr10	7815034	7815787	4
  • chr10	12304291	12304936	chr10	12350443	12350962	3
  • chr10	12385675	12386329	chr10	13666731	13667286	7
  • chr10	13702881	13705037	chr10	13756425	13758097	7
  • chr10	13705985	13709338	chr10	13756697	13758314	21
  • chr10	17126928	17127506	chr10	17228472	17229113	3
  • chr10	21375686	21376322	chr10	21518433	21519029	3
  • chr10	24898923	24902803	chr10	24926312	24931027	44
  • chr10	26438101	26439181	chr10	27242353	27243347	4
  • chr10	28574013	28576019	chr10	28587419	28589270	7
  • chr10	50386392	50386930	chr10	50399844	50400495	3
  • chr10	51729444	51730574	chr10	51744207	51745178	3
  • chr10	56463864	56464389	chr10	56682161	56682812	3
  • chr10	58274081	58274667	chr10	118753932	118754532	4
  • chr10	69087276	69087927	chr10	69323495	69324109	3
  • chr10	71692725	71694863	chr10	71771787	71773472	5
  • chr10	72252145	72252797	chr10	72331642	72332264	8
  • chr10	73094521	73098428	chr10	73115229	73119745	37
  • chr10	73848421	73849002	chr10	74119945	74120581	5
  • chr10	74169021	74169959	chr10	74179688	74180688	4
  • chr10	75000732	75002150	chr10	75014460	75015460	4
  • chr10	92948892	92949544	chr10	92965290	92965918	3
  • chr10	96763385	96764908	chr10	97025290	97026256	5
  • chr10	102433332	102433985	chr10	124046281	124046890	5
  • chr10	103449976	103454510	chr10	103474236	103478032	35
  • chr10	105868597	105869213	chr10	107475996	107476567	3