Task

No title

59693681-a57c-428b-90ee-15536f7f6c1f
Submitted at: March 3, 2025, 1:45 p.m.
Task status: Finished
Number of beads: 130
Number of restraints: 7
Initial Structure type: line
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Structure energy: 52.659 kJ/mol
Beads per interaction: 18.571 beads/interaction
base pairs per interaction: 185 714 bp/interaction
Region: chr17:58700000-60000000
Region length: 1 300 001 bp
Effective resolution: 10000 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads
arc diagram
Arc height is proportional to it's length.
Restraints
  • 10 78
  • 38 77
  • 59 78
  • 69 78
  • 80 94
  • 80 122
  • 102 122
Interactions 
  • chr17	58790000	58800000	chr17	59470000	59480000	40
  • chr17	59070000	59075000	chr17	59465000	59470000	36
  • chr17	59280000	59290000	chr17	59470000	59480000	117
  • chr17	59385000	59390000	chr17	59470000	59475000	61
  • chr17	59490000	59495000	chr17	59630000	59635000	38
  • chr17	59490000	59500000	chr17	59910000	59920000	39
  • chr17	59710000	59715000	chr17	59910000	59915000	52
Interactive structure preview
genome coordinates
58700000
58960000
59220000
59480000
59740000
60000000
1
13
26
39
52
65
78
91
104
117
130
model coordinates
Distance map distance map