Task

Fiona

5b0829b4-e8c6-43c9-b833-767be72f6f3a

Submitted at:	Sept. 17, 2025, 8:19 a.m.
Task status:	Finished
Number of beads:	31
Number of restraints:	25
Initial Structure type:	pure random walk
Excluded volume:	True
Refinement:	Yes
Stiffness:	10.0 kJ/mol/rad²
Structure energy:	46.202 kJ/mol
Beads per interaction:	1.240 beads/interaction
Title: Up to 255 characters Initial structure type: line circle self-avoiding random walk pure random walk baseball Stiffness: Values between 0 and 100 are suitable for most cases. Spherical container: Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint. Refinement: May significantly extend computation time. Excluded volume: Check to include ev term Number of beads: The limits are: 5 - 2000 Resolution: Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region Restraints: 1 3 2 4 3 5 4 6 6 8 11 13 12 14 12 15 12 16 12 17 13 15 13 16 13 19 14 16 15 17 15 19 16 18 16 19 17 19 17 20 19 21 21 23 22 25 23 26 24 26 Region: Genomic region in format chrN:xxx-yyy Interactions: BEDPE format.
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Result structure Initial structure Pseudo bonds for UCSF Chimera
Arc height is proportional to it's length.
Restraints 1 3 2 4 3 5 4 6 6 8 11 13 12 14 12 15 12 16 12 17 13 15 13 16 13 19 14 16 15 17 15 19 16 18 16 19 17 19 17 20 19 21 21 23 22 25 23 26 24 26

Interactive structure preview

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model coordinates

Distance map

distance map