Task

chr21:34742994-35841370

776643f4-662f-4369-9a08-db903908ee47
Submitted at: June 24, 2024, 12:39 p.m.
Task status: Finished
Number of beads: 1098
Number of restraints: 4
Initial Structure type: pure random walk
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Structure energy: 602.199 kJ/mol
Beads per interaction: 274.500 beads/interaction
base pairs per interaction: 274 594 bp/interaction
Region: chr21:34742994-35841370
Region length: 1 098 377 bp
Effective resolution: 1000 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads
arc diagram
Arc height is proportional to it's length.
Restraints
  • 553 874
  • 991 1021
  • 997 1021
  • 1021 1060
Interactions 
  • chr21	35293903	35297936	chr21	35614778	35617346	41
  • chr21	35731841	35735180	chr21	35762276	35764938	4
  • chr21	35738372	35740501	chr21	35762276	35764938	4
  • chr21	35762276	35764938	chr21	35801796	35803034	4
Interactive structure preview
genome coordinates
34742994
34962669
35182344
35402019
35621694
35841370
1
110
220
330
439
549
659
768
878
988
1098
model coordinates
Distance map distance map