Task

Title: Up to 255 characters

Initial structure type:

Stiffness: Values between 0 and 100 are suitable for most cases.

Spherical container: Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

Refinement: May significantly extend computation time.

Excluded volume: Check to include ev term

Number of beads: The limits are: 5 - 2000

Resolution: Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Restraints:

Region: Genomic region in format chrN:xxx-yyy

Interactions: chr10 126856 128568 chr10 135802 137802 34 chr10 128053 128553 chr10 15088582 15089086 3 chr10 135661 136167 chr10 7185651 7186151 3 chr10 135890 136790 chr10 182278 183421 4 chr10 135882 137796 chr10 469903 471400 7 chr10 136866 137796 chr10 181994 183091 5 chr10 182078 182991 chr10 381517 383024 4 chr10 182291 183088 chr10 988033 988791 4 chr10 182332 183079 chr10 453609 455028 3 chr10 182342 183218 chr10 485206 486417 5 chr10 182580 183083 chr10 27153224 27153724 3 chr10 181900 183764 chr10 469895 471117 12 chr10 182336 183419 chr10 324171 324768 4 chr10 182349 183415 chr10 264766 265857 4 chr10 182346 183421 chr10 351608 352752 9 chr10 182349 183474 chr10 511183 511704 4 chr10 182169 183771 chr10 220691 221611 7 chr10 182570 183471 chr10 333417 334235 8 chr10 182761 183421 chr10 283855 284764 3 chr10 182583 183773 chr10 228426 229334 4 chr10 182913 183474 chr10 1049045 1049981 3 chr10 182541 184042 chr10 450088 451477 5 chr10 221098 221745 chr10 500562 501082 3 chr10 263983 266006 chr10 282030 284764 15 chr10 264766 265384 chr10 324273 324912 3 chr10 282041 283030 chr10 351833 353207 4 chr10 282838 283911 chr10 450594 451654 3 chr10 283420 283942 chr10 329002 329806 3 chr10 283249 284758 chr10 333199 334349 11 chr10 283439 284712 chr10 314624 315603 5 chr10 283412 284764 chr10 351548 352748 5 chr10 283460 284761 chr10 469895 471322 9 chr10 283485 284780 chr10 381481 382172 4 chr10 313481 316252 chr10 332895 334873 19 BEDPE format.