Task

Title: Up to 255 characters

Initial structure type:

Stiffness: Values between 0 and 100 are suitable for most cases.

Spherical container: Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

Refinement: May significantly extend computation time.

Excluded volume: Check to include ev term

Number of beads: The limits are: 5 - 2000

Resolution: Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Restraints:

Region: Genomic region in format chrN:xxx-yyy

Interactions: chr9 118645687 118646736 chr9 118763155 118763339 3 chr9 118914627 118914973 chr9 119421448 119422232 3 chr9 118668641 118669078 chr9 118891061 118891272 2 chr9 119355123 119355259 chr9 119409643 119409794 2 chr9 119025979 119026073 chr9 119334612 119334772 2 chr9 118833837 118834183 chr9 118845983 118846177 2 chr9 118355381 118356033 chr9 118771866 118772453 2 chr9 118645950 118646658 chr9 119257247 119257728 3 chr9 118943315 118943413 chr9 119409247 119409311 2 chr9 118355944 118356468 chr9 118912473 118912532 2 chr9 119248515 119248783 chr9 119257529 119257624 2 chr9 118925883 118925966 chr9 119332127 119332533 2 chr9 119333699 119334500 chr9 119409592 119410284 3 chr9 118646156 118646307 chr9 119334371 119334722 3 chr9 118471497 118471888 chr9 118483278 118483469 2 chr9 119329468 119329592 chr9 119337732 119338126 2 chr9 118355206 118356016 chr9 118925809 118926126 3 chr9 118456216 118456412 chr9 119257285 119257736 2 chr9 118912194 118912240 chr9 118930337 118930488 2 chr9 118920455 118920786 chr9 118937638 118937847 2 chr9 118925717 118926053 chr9 119421259 119421500 3 chr9 119064008 119064353 chr9 119144762 119145420 2 chr9 118646153 118646262 chr9 119422475 119422695 2 chr9 119349377 119350053 chr9 119423308 119423508 2 chr9 118357833 118358380 chr9 119334095 119334757 3 chr9 118927433 118928067 chr9 119334325 119334734 2 chr9 119351473 119352028 chr9 119416121 119416909 2 chr9 118355925 118356167 chr9 118512827 118512901 2 chr9 118353331 118354216 chr9 119333348 119335557 4 chr9 118353331 118354216 chr9 119408919 119410240 5 chr9 118353331 118354216 chr9 119422559 119424379 6 chr9 118355332 118358172 chr9 119256183 119258133 4 chr9 118355332 118358172 chr9 119333348 119335557 12 chr9 118355332 118358172 chr9 119408919 119410240 4 chr9 118355332 118358172 chr9 119422559 119424379 16 chr9 118645379 118646625 chr9 119408919 119410240 4 chr9 118645379 118646625 chr9 119422559 119424379 9 chr9 118911436 118913722 chr9 119333348 119335557 27 chr9 118911436 118913722 chr9 119408919 119410240 8 chr9 118911436 118913722 chr9 119422559 119424379 16 chr9 118924055 118926601 chr9 119256183 119258133 11 chr9 118924055 118926601 chr9 119333348 119335557 26 chr9 118924055 118926601 chr9 119408919 119410240 9 chr9 118924055 118926601 chr9 119422559 119424379 12 chr9 119256183 119258133 chr9 119333348 119335557 13 chr9 119256183 119258133 chr9 119422559 119424379 8 chr9 118911436 118913722 chr9 118924055 118926601 4 BEDPE format.