Task

F extended

858bd041-ebcf-4fc1-ab9a-2961da45c298

Submitted at:	Sept. 17, 2025, 1:10 p.m.
Task status:	Finished
Number of beads:	121
Number of restraints:	45
Initial Structure type:	pure random walk
Excluded volume:	True
Refinement:	Yes
Stiffness:	10.0 kJ/mol/rad²
Structure energy:	152.103 kJ/mol
Beads per interaction:	2.689 beads/interaction
Title: Up to 255 characters Initial structure type: line circle self-avoiding random walk pure random walk baseball Stiffness: Values between 0 and 100 are suitable for most cases. Spherical container: Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint. Refinement: May significantly extend computation time. Excluded volume: Check to include ev term Number of beads: The limits are: 5 - 2000 Resolution: Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region Restraints: 10 12 14 16 21 23 30 32 36 38 47 49 48 50 48 58 48 59 49 57 49 61 49 64 53 55 54 57 55 57 55 58 56 58 58 60 58 75 61 65 62 75 71 74 72 75 72 85 73 75 73 78 74 77 75 80 75 81 75 86 78 80 78 82 79 81 79 82 80 82 80 83 81 84 81 86 82 86 82 92 83 86 84 87 85 87 99 101 117 119 Region: Genomic region in format chrN:xxx-yyy Interactions: BEDPE format.
Downloads
Result structure Initial structure Pseudo bonds for UCSF Chimera
Arc height is proportional to it's length.
Restraints 10 12 14 16 21 23 30 32 36 38 47 49 48 50 48 58 48 59 49 57 49 61 49 64 53 55 54 57 55 57 55 58 56 58 58 60 58 75 61 65 62 75 71 74 72 75 72 85 73 75 73 78 74 77 75 80 75 81 75 86 78 80 78 82 79 81 79 82 80 82 80 83 81 84 81 86 82 86 82 92 83 86 84 87 85 87 99 101 117 119

Interactive structure preview

1

13

25

37

49

61

73

85

97

109

121

model coordinates

Distance map

distance map