Task

chr20:22333053-23448334

Submitted at:	June 24, 2024, 12:22 p.m.
Task status:	Finished
Number of beads:	1115
Number of restraints:	1
Initial Structure type:	pure random walk
Excluded volume:	True
Refinement:	No
Stiffness:	10.0 kJ/mol/rad²
Structure energy:	969.614 kJ/mol
Beads per interaction:	1115 beads/interaction
base pairs per interaction:	1 115 282 bp/interaction
Region:	chr20:22333053-23448334
Region length:	1 115 282 bp
Effective resolution:	1000 bp/bead
Title: Up to 255 characters Initial structure type: line circle self-avoiding random walk pure random walk baseball Stiffness: Values between 0 and 100 are suitable for most cases. Spherical container: Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint. Refinement: May significantly extend computation time. Excluded volume: Check to include ev term Number of beads: The limits are: 5 - 2000 Resolution: Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region Restraints: Region: Genomic region in format chrN:xxx-yyy Interactions: chr20 22566157 22568805 chr20 22662338 22666396 5 BEDPE format.
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Result structure Initial structure Pseudo bonds for UCSF Chimera
Arc height is proportional to it's length.
Restraints 235 332
Interactions chr20 22566157 22568805 chr20 22662338 22666396 5

Interactive structure preview

genome coordinates

22333053

22556109

22779165

23002221

23225277

23448334

112

223

335

446

558

669

780

892

1003

1115

model coordinates

Distance map