Task

chr14:31978765-33030774

b31a5afe-6721-40a3-bf24-522cca9c6fd8
Submitted at: June 24, 2024, 12:25 p.m.
Task status: Finished
Number of beads: 1052
Number of restraints: 7
Initial Structure type: pure random walk
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Structure energy: 1058.298 kJ/mol
Beads per interaction: 150.286 beads/interaction
base pairs per interaction: 150 287 bp/interaction
Region: chr14:31978765-33030774
Region length: 1 052 010 bp
Effective resolution: 1000 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads
arc diagram
Arc height is proportional to it's length.
Restraints
  • 2 566
  • 2 961
  • 2 1051
  • 416 566
  • 416 736
  • 416 961
  • 2 416
Interactions 
  • chr14	31978770	31981915	chr14	32541242	32546620	7
  • chr14	31978770	31981915	chr14	32937908	32940037	7
  • chr14	31978770	31981915	chr14	33027847	33030289	7
  • chr14	32392234	32397112	chr14	32541242	32546620	4
  • chr14	32392234	32397112	chr14	32713538	32714527	4
  • chr14	32392234	32397112	chr14	32937908	32940037	9
  • chr14	31978770	31981915	chr14	32392234	32397112	5
Interactive structure preview
genome coordinates
31978765
32189166
32399568
32609970
32820372
33030774
1
106
211
316
421
526
631
736
841
946
1052
model coordinates
Distance map distance map