Task

chr9:118353331-119424379

c51c3eee-2974-45cc-b739-8d1e156210ef

Submitted at:	June 24, 2024, 8:52 a.m.
Task status:	Error
Number of beads:	535
Number of restraints:	70
Initial Structure type:	pure random walk
Excluded volume:	True
Refinement:	No
Stiffness:	10.0 kJ/mol/rad²
Beads per interaction:	7.643 beads/interaction
base pairs per interaction:	15 085 bp/interaction
Region:	chr9:118353331-119424379
Region length:	1 071 049 bp
Effective resolution:	2002 bp/bead
Title: Up to 255 characters Initial structure type: line circle self-avoiding random walk pure random walk baseball Stiffness: Values between 0 and 100 are suitable for most cases. Spherical container: Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint. Refinement: May significantly extend computation time. Excluded volume: Check to include ev term Number of beads: The limits are: 5 - 2000 Resolution: Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region Restraints: Region: Genomic region in format chrN:xxx-yyy Interactions: chr9 118924117 118924207 chr9 118933580 118933645 2 chr9 118912133 118912391 chr9 119257503 119257630 3 chr9 118914543 118915026 chr9 119256975 119257539 3 chr9 119352070 119352184 chr9 119421527 119421904 2 chr9 118355967 118356078 chr9 118874795 118875026 2 chr9 119351719 119352063 chr9 119411374 119412035 2 chr9 118909669 118910259 chr9 119423540 119423691 2 chr9 118355889 118356242 chr9 119409582 119409754 3 chr9 118355904 118355996 chr9 119421607 119422116 2 chr9 118763171 118763270 chr9 119060751 119060815 2 chr9 118925914 118925959 chr9 119335412 119335791 2 chr9 118912335 118912505 chr9 119047718 119047869 2 chr9 118645946 118646334 chr9 118929145 118929879 2 chr9 119356427 119356631 chr9 119423792 119423829 2 chr9 119212869 119213024 chr9 119257395 119257517 2 chr9 118355911 118356259 chr9 118914877 118915519 2 chr9 119100233 119100292 chr9 119178302 119178358 2 chr9 119077926 119078037 chr9 119280835 119280978 2 chr9 118725865 118726152 chr9 118735028 118735441 2 chr9 119334566 119334856 chr9 119422985 119423610 3 chr9 118770018 118770433 chr9 118779042 118779208 2 chr9 118581619 118581661 chr9 118617708 118617808 2 chr9 118353849 118354155 chr9 118929140 118929277 3 chr9 118358995 118359759 chr9 119423044 119423516 2 chr9 118645687 118646736 chr9 118763155 118763339 3 chr9 118914627 118914973 chr9 119421448 119422232 3 chr9 118668641 118669078 chr9 118891061 118891272 2 chr9 119355123 119355259 chr9 119409643 119409794 2 chr9 119025979 119026073 chr9 119334612 119334772 2 chr9 118833837 118834183 chr9 118845983 118846177 2 chr9 118355381 118356033 chr9 118771866 118772453 2 chr9 118645950 118646658 chr9 119257247 119257728 3 chr9 118943315 118943413 chr9 119409247 119409311 2 chr9 118355944 118356468 chr9 118912473 118912532 2 chr9 119248515 119248783 chr9 119257529 119257624 2 chr9 118925883 118925966 chr9 119332127 119332533 2 chr9 119333699 119334500 chr9 119409592 119410284 3 chr9 118646156 118646307 chr9 119334371 119334722 3 chr9 118471497 118471888 chr9 118483278 118483469 2 chr9 119329468 119329592 chr9 119337732 119338126 2 chr9 118355206 118356016 chr9 118925809 118926126 3 chr9 118456216 118456412 chr9 119257285 119257736 2 chr9 118912194 118912240 chr9 118930337 118930488 2 chr9 118920455 118920786 chr9 118937638 118937847 2 chr9 118925717 118926053 chr9 119421259 119421500 3 chr9 119064008 119064353 chr9 119144762 119145420 2 chr9 118646153 118646262 chr9 119422475 119422695 2 chr9 119349377 119350053 chr9 119423308 119423508 2 chr9 118357833 118358380 chr9 119334095 119334757 3 chr9 118927433 118928067 chr9 119334325 119334734 2 chr9 119351473 119352028 chr9 119416121 119416909 2 chr9 118355925 118356167 chr9 118512827 118512901 2 chr9 118353331 118354216 chr9 119333348 119335557 4 chr9 118353331 118354216 chr9 119408919 119410240 5 chr9 118353331 118354216 chr9 119422559 119424379 6 chr9 118355332 118358172 chr9 119256183 119258133 4 chr9 118355332 118358172 chr9 119333348 119335557 12 chr9 118355332 118358172 chr9 119408919 119410240 4 chr9 118355332 118358172 chr9 119422559 119424379 16 chr9 118645379 118646625 chr9 119408919 119410240 4 chr9 118645379 118646625 chr9 119422559 119424379 9 chr9 118911436 118913722 chr9 119333348 119335557 27 chr9 118911436 118913722 chr9 119408919 119410240 8 chr9 118911436 118913722 chr9 119422559 119424379 16 chr9 118924055 118926601 chr9 119256183 119258133 11 chr9 118924055 118926601 chr9 119333348 119335557 26 chr9 118924055 118926601 chr9 119408919 119410240 9 chr9 118924055 118926601 chr9 119422559 119424379 12 chr9 119256183 119258133 chr9 119333348 119335557 13 chr9 119256183 119258133 chr9 119422559 119424379 8 chr9 118911436 118913722 chr9 118924055 118926601 4 BEDPE format.
Downloads
Initial structure Pseudo bonds for UCSF Chimera
Arc height is proportional to it's length.
Restraints 286 291 280 453 281 452 500 535 2 261 500 530 279 536 2 529 2 535 205 354 287 492 280 348 147 289 502 536 430 453 2 281 374 413 363 464 187 191 491 535 209 213 115 133 1 288 4 535 147 205 281 535 158 269 501 529 337 491 241 247 2 210 147 453 296 528 2 280 448 453 287 490 491 529 147 491 60 66 489 493 2 287 52 453 280 289 284 293 287 535 356 396 147 535 499 536 3 491 288 491 500 532 2 80 1 491 1 529 1 536 2 452 2 491 2 536 147 529 147 536 280 491 280 529 280 536 286 452 286 491 286 529 286 536 452 491 452 536 280 286
Interactions chr9 118924117 118924207 chr9 118933580 118933645 2 chr9 118912133 118912391 chr9 119257503 119257630 3 chr9 118914543 118915026 chr9 119256975 119257539 3 chr9 119352070 119352184 chr9 119421527 119421904 2 chr9 118355967 118356078 chr9 118874795 118875026 2 chr9 119351719 119352063 chr9 119411374 119412035 2 chr9 118909669 118910259 chr9 119423540 119423691 2 chr9 118355889 118356242 chr9 119409582 119409754 3 chr9 118355904 118355996 chr9 119421607 119422116 2 chr9 118763171 118763270 chr9 119060751 119060815 2 chr9 118925914 118925959 chr9 119335412 119335791 2 chr9 118912335 118912505 chr9 119047718 119047869 2 chr9 118645946 118646334 chr9 118929145 118929879 2 chr9 119356427 119356631 chr9 119423792 119423829 2 chr9 119212869 119213024 chr9 119257395 119257517 2 chr9 118355911 118356259 chr9 118914877 118915519 2 chr9 119100233 119100292 chr9 119178302 119178358 2 chr9 119077926 119078037 chr9 119280835 119280978 2 chr9 118725865 118726152 chr9 118735028 118735441 2 chr9 119334566 119334856 chr9 119422985 119423610 3 chr9 118770018 118770433 chr9 118779042 118779208 2 chr9 118581619 118581661 chr9 118617708 118617808 2 chr9 118353849 118354155 chr9 118929140 118929277 3 chr9 118358995 118359759 chr9 119423044 119423516 2 chr9 118645687 118646736 chr9 118763155 118763339 3 chr9 118914627 118914973 chr9 119421448 119422232 3 chr9 118668641 118669078 chr9 118891061 118891272 2 chr9 119355123 119355259 chr9 119409643 119409794 2 chr9 119025979 119026073 chr9 119334612 119334772 2 chr9 118833837 118834183 chr9 118845983 118846177 2 chr9 118355381 118356033 chr9 118771866 118772453 2 chr9 118645950 118646658 chr9 119257247 119257728 3 chr9 118943315 118943413 chr9 119409247 119409311 2 chr9 118355944 118356468 chr9 118912473 118912532 2 chr9 119248515 119248783 chr9 119257529 119257624 2 chr9 118925883 118925966 chr9 119332127 119332533 2 chr9 119333699 119334500 chr9 119409592 119410284 3 chr9 118646156 118646307 chr9 119334371 119334722 3 chr9 118471497 118471888 chr9 118483278 118483469 2 chr9 119329468 119329592 chr9 119337732 119338126 2 chr9 118355206 118356016 chr9 118925809 118926126 3 chr9 118456216 118456412 chr9 119257285 119257736 2 chr9 118912194 118912240 chr9 118930337 118930488 2 chr9 118920455 118920786 chr9 118937638 118937847 2 chr9 118925717 118926053 chr9 119421259 119421500 3 chr9 119064008 119064353 chr9 119144762 119145420 2 chr9 118646153 118646262 chr9 119422475 119422695 2 chr9 119349377 119350053 chr9 119423308 119423508 2 chr9 118357833 118358380 chr9 119334095 119334757 3 chr9 118927433 118928067 chr9 119334325 119334734 2 chr9 119351473 119352028 chr9 119416121 119416909 2 chr9 118355925 118356167 chr9 118512827 118512901 2 chr9 118353331 118354216 chr9 119333348 119335557 4 chr9 118353331 118354216 chr9 119408919 119410240 5 chr9 118353331 118354216 chr9 119422559 119424379 6 chr9 118355332 118358172 chr9 119256183 119258133 4 chr9 118355332 118358172 chr9 119333348 119335557 12 chr9 118355332 118358172 chr9 119408919 119410240 4 chr9 118355332 118358172 chr9 119422559 119424379 16 chr9 118645379 118646625 chr9 119408919 119410240 4 chr9 118645379 118646625 chr9 119422559 119424379 9 chr9 118911436 118913722 chr9 119333348 119335557 27 chr9 118911436 118913722 chr9 119408919 119410240 8 chr9 118911436 118913722 chr9 119422559 119424379 16 chr9 118924055 118926601 chr9 119256183 119258133 11 chr9 118924055 118926601 chr9 119333348 119335557 26 chr9 118924055 118926601 chr9 119408919 119410240 9 chr9 118924055 118926601 chr9 119422559 119424379 12 chr9 119256183 119258133 chr9 119333348 119335557 13 chr9 119256183 119258133 chr9 119422559 119424379 8 chr9 118911436 118913722 chr9 118924055 118926601 4