Task

test2

d029bbae-2421-4d0b-906c-abcc0f99890c
Submitted at: Jan. 9, 2026, 3:42 p.m.
Task status: Finished
Number of beads: 168
Number of restraints: 9
Initial Structure type: self-avoiding random walk
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Structure energy: 89.625 kJ/mol
Beads per interaction: 18.667 beads/interaction
base pairs per interaction: 93 333 bp/interaction
Region: chr16:85822500-86662500
Region length: 840 001 bp
Effective resolution: 5000 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads

arc diagram
Arc height is proportional to it's length.
Restraints
  • 51 81
  • 51 141
  • 81 97
  • 81 114
  • 81 128
  • 81 138
  • 97 115
  • 97 138
  • 115 138
Interactions
  • chr16	86070000	86075000	chr16	86220000	86225000	1
  • chr16	86070000	86075000	chr16	86520000	86525000	1
  • chr16	86220000	86225000	chr16	86300000	86305000	1
  • chr16	86220000	86225000	chr16	86385000	86390000	1
  • chr16	86220000	86225000	chr16	86455000	86460000	1
  • chr16	86220000	86225000	chr16	86505000	86510000	1
  • chr16	86300000	86305000	chr16	86390000	86395000	1
  • chr16	86300000	86305000	chr16	86505000	86510000	1
  • chr16	86390000	86395000	chr16	86505000	86510000	1
Interactive structure preview
genome coordinates
85822500
85990500
86158500
86326500
86494500
86662500
1
17
34
51
67
84
101
117
134
151
168
model coordinates
Distance map distance map