Task

Fiona

d16289d1-1a66-44fe-b762-ba86780624af

Submitted at:	Sept. 17, 2025, 11:21 a.m.
Task status:	Finished
Number of beads:	61
Number of restraints:	22
Initial Structure type:	pure random walk
Excluded volume:	True
Refinement:	Yes
Stiffness:	10.0 kJ/mol/rad²
Structure energy:	79.126 kJ/mol
Beads per interaction:	2.773 beads/interaction
Title: Up to 255 characters Initial structure type: line circle self-avoiding random walk pure random walk baseball Stiffness: Values between 0 and 100 are suitable for most cases. Spherical container: Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint. Refinement: May significantly extend computation time. Excluded volume: Check to include ev term Number of beads: The limits are: 5 - 2000 Resolution: Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region Restraints: 1 13 5 7 6 9 7 9 7 10 8 10 10 12 10 27 25 27 26 29 27 32 27 33 27 38 30 32 30 34 31 33 31 34 32 34 32 35 34 38 35 38 37 39 Region: Genomic region in format chrN:xxx-yyy Interactions: BEDPE format.
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Result structure Initial structure Pseudo bonds for UCSF Chimera
Arc height is proportional to it's length.
Restraints 1 13 5 7 6 9 7 9 7 10 8 10 10 12 10 27 25 27 26 29 27 32 27 33 27 38 30 32 30 34 31 33 31 34 32 34 32 35 34 38 35 38 37 39

Interactive structure preview

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model coordinates

Distance map

distance map