Task

chr2:155258285-156168281

d74d3d47-6a70-4e20-8f4c-089adc58c369
Submitted at: June 24, 2024, 8:30 a.m.
Task status: Finished
Number of beads: 909
Number of restraints: 6
Initial Structure type: self-avoiding random walk
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Structure energy: 309.398 kJ/mol
Beads per interaction: 151.500 beads/interaction
base pairs per interaction: 151 666 bp/interaction
Region: chr2:155258285-156168281
Region length: 909 997 bp
Effective resolution: 1001 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads
arc diagram
Arc height is proportional to it's length.
Restraints
  • 147 191
  • 1 823
  • 52 850
  • 223 823
  • 823 909
  • 850 909
Interactions 
  • chr2	155404718	155404832	chr2	155449027	155449123	3
  • chr2	155258486	155259033	chr2	156079464	156081393	7
  • chr2	155309109	155310742	chr2	156106906	156108291	9
  • chr2	155479699	155481692	chr2	156079464	156081393	41
  • chr2	156079464	156081393	chr2	156165877	156168281	5
  • chr2	156106906	156108291	chr2	156165877	156168281	4
Interactive structure preview
genome coordinates
155258285
155440284
155622283
155804282
155986281
156168281
1
91
182
273
364
455
545
636
727
818
909
model coordinates
Distance map distance map