Task

No title

f7b9f263-0c9c-4971-b588-b5ef59f40339
Submitted at: March 3, 2025, 3:24 p.m.
Task status: Finished
Number of beads: 150
Number of restraints: 7
Initial Structure type: circle
Excluded volume: True
Refinement: No
Stiffness: 10.0 kJ/mol/rad2
Structure energy: 68.873 kJ/mol
Beads per interaction: 21.429 beads/interaction
base pairs per interaction: 214 286 bp/interaction
Region: chr17:58600000-60100000
Region length: 1 500 001 bp
Effective resolution: 10000 bp/bead

Up to 255 characters

Values between 0 and 100 are suitable for most cases.

Diameter of container in σ (bead diameter) units. Leave empty for modelling without this constraint.

May significantly extend computation time.

Check to include ev term

The limits are: 5 - 2000

Values between 1000 - 100 000 are usually reasonable and strongly depend on size of modelling region

Genomic region in format chrN:xxx-yyy

BEDPE format.

Downloads
arc diagram
Arc height is proportional to it's length.
Restraints
  • 20 88
  • 48 87
  • 69 88
  • 79 88
  • 90 104
  • 90 132
  • 112 132
Interactions 
  • chr17	58790000	58800000	chr17	59470000	59480000	40
  • chr17	59070000	59075000	chr17	59465000	59470000	36
  • chr17	59280000	59290000	chr17	59470000	59480000	117
  • chr17	59385000	59390000	chr17	59470000	59475000	61
  • chr17	59490000	59495000	chr17	59630000	59635000	38
  • chr17	59490000	59500000	chr17	59910000	59920000	39
  • chr17	59710000	59715000	chr17	59910000	59915000	52
Interactive structure preview
genome coordinates
58600000
58900000
59200000
59500000
59800000
60100000
1
15
30
45
60
75
90
105
120
135
150
model coordinates
Distance map distance map